Interactive Demos

Explore these fun interactive explainers for Biochemistry, Enhanced Sampling, and Deep Learning.

Autoencoder

An interactive, visual explanation of how an autoencoder works, compressing and reconstructing data.

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autoencoder.html

GPU Clustering

A visual explainer focusing on accelerating clustering algorithms and balanced sampling on GPUs.

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cluster.html

Lennard-Jones MD

A high-performance molecular dynamics simulator using the Lennard-Jones potential, featuring energy conservation and ensemble controls.

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ljsimulator.html

Metadynamics

An interactive Free Energy Landscape Explorer demonstrating Well-Tempered Metadynamics and algorithmic rare-event sampling.

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metadynamics.html

Amino Explorer

A standalone biochemistry dashboard with 3D molecular structures, chemical property quizzes, and a peptide builder.

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amino_explorer.html